pIMZ: python-based Imaging Mass Spectrometry (IMS) data analysisΒΆ

pIMZ is a framework for Imaging Mass Spectrometry (IMS) data analysis. The python implementation is available from github.com/mjoppich/pIMZ. For installation follow the instructions given in the GitHub repository.

pIMZ focuses on a differential setting, where masses, specific to certain areas are first determined, and then serve as input for a cell-type detection framework and/or a differential expression setting.